PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.58D1A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 193aa    MW: 22762.2 Da    PI: 10.7377
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.58D1AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.58.3e-43191431128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                  lppGfrF+Pt+eel+ +yLk kv + +l++ ++i+e+++++++PwdLp        e y Fs+++ ky++g+r nr+tksgyWkatg+dk+++s+   
  Aradu.58D1A  19 LPPGFRFQPTEEELLFQYLKCKVFSFQLPA-SIIPEINVCNYDPWDLP--------ERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTssn 107
                  79****************************.89**************9........67***********************************99777 PP

          NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++ vg++ktLvfy+g++p+g++t+W+m eyrl
  Aradu.58D1A 108 nnnNNNIVGIRKTLVFYHGKSPNGSRTHWIMREYRL 143
                  6655666***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-5117169IPR003441NAC domain
PROSITE profilePS5100546.69319169IPR003441NAC domain
PfamPF023653.1E-2220143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MMSKKMRFVK KNKNGVRLLP PGFRFQPTEE ELLFQYLKCK VFSFQLPASI IPEINVCNYD  60
PWDLPERYLF SSKEVKYRNG NRMNRITKSG YWKATGSDKR IISTSSNNNN NNNIVGIRKT  120
LVFYHGKSPN GSRTHWIMRE YRLVTTPSNS SQKYVEDLGN WVLCRIFKKK RSIESQHHMV  180
KNKINNNVVE SFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-461917417170NO APICAL MERISTEM PROTEIN
1ut4_B3e-461917417170NO APICAL MERISTEM PROTEIN
1ut7_A3e-461917417170NO APICAL MERISTEM PROTEIN
1ut7_B3e-461917417170NO APICAL MERISTEM PROTEIN
3swm_A3e-461917420173NAC domain-containing protein 19
3swm_B3e-461917420173NAC domain-containing protein 19
3swm_C3e-461917420173NAC domain-containing protein 19
3swm_D3e-461917420173NAC domain-containing protein 19
3swp_A3e-461917420173NAC domain-containing protein 19
3swp_B3e-461917420173NAC domain-containing protein 19
3swp_C3e-461917420173NAC domain-containing protein 19
3swp_D3e-461917420173NAC domain-containing protein 19
4dul_A3e-461917417170NAC domain-containing protein 19
4dul_B3e-461917417170NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937760.11e-125PREDICTED: NAC domain-containing protein 83 isoform X1
SwissprotQ9FY931e-63NAC83_ARATH; NAC domain-containing protein 83
TrEMBLA0A0B2QBQ28e-84A0A0B2QBQ2_GLYSO; NAC domain-containing protein 29
TrEMBLI1K6Q98e-84I1K6Q9_SOYBN; Uncharacterized protein
STRINGGLYMA05G38380.12e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70434139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-63NAC domain containing protein 83